Search Results
64 items found for "Genome sequence"
- GPR15 expressed in T lymphocytes from RA patients is involved in leukocyte chemotaxis to the...
GPR15 is a G protein-coupled receptor (GPCR) located on chromosome 3 and has similarity in its sequence synovial fluid and peripheral blood were analyzed for CD45+CD3+CD4+GPR15+ and CD45+CD3+CD8+GPR15+ T cell frequency The frequencies of CD4+/CD8+ GPR15+ T lymphocytes are higher in RA patients comparing with healthy subjects Also, the frequency CD4+/CD8+ GPR15+ T lymphocytes are higher in synovial fluid of established RA patients
- The Gluopsins: Opsins without the Retinal Binding Lysine
The lysine is so conserved that it is used to define a sequence as an opsin and thus phylogenetic opsin reconstructions discard any sequence without it. The pipeline compiles and aligns sequences from public sources, reconstructs the phylogeny, prunes rogue sequences, and visualizes the resulting tree.
- Dynamic GPCR activation revealed through time-resolved Cryo-EM
monitor the transitions of the Gs protein in complex with the β2-adrenergic receptor (β2AR) at brief sequential previous studies that provided only static snapshots, this approach captures the entire activation sequence
- AlphaFold’s Breakthrough in GPCR Research: Revolutionizing Discovery, Yet Awaiting Experimental Proof
For proteins with low sequence similarity to available templates, homology models tend to be less accurate allowing it to predict structures for GPCRs that were previously difficult to model due to their low sequence
- Regulation of pulmonary surfactant by the adhesion GPCR GPR116/ADGRF5 requires a tethered agonist...
investigate the physiological importance of autocatalytic cleavage upstream of the agonistic peptide sequence species-swapping approaches, we identified key conserved amino acids for GPR116 activation in the tethered agonist sequence
- Microbial Metabolites Orchestrate a Distinct Multi-Tiered Regulatory Network in the Intestinal Epith
RNA sequencing of intestinal epithelial cells responding to butyrate and secondary bile acids in combination shRNA knockdown and CRISPR/Cas9 knockout cell lines, as well as mouse models, we confirmed the RNA sequencing
- Functional molecular switches of mammalian G protein-coupled bitter-taste receptors
in the literature as constraints, we pinpointed conserved motifs to entirely re-align the amino-acid sequences This combination of in silico and in vitro results clarifies sequence-function relationships and proposes molecular switches that encode agonist sensing and downstream signaling mechanisms within mammalian TAS2Rs sequences
- Decoding GPCR Function: The Role of Mutagenesis in Rational Drug Discovery
Mutagenesis involves deliberately altering the DNA sequence of a gene to study the resulting changes has been used to identify specificity-determining positions without prior knowledge of structure or sequence
- GPCRs are not simple on-off switches: deep dive into GPCR-ligand interactions
Moreover, they have the potential to enhance target selectivity, which can arise from greater sequence Agonist binding to GPCRs doesn't always trigger all associated events sequentially.
- Bursicon receptor gene HLGR2 as a potential RNA interference target for control of the fall ...
Results: The complementary DNA (cDNA) sequence and deduced amino acids of HLGR2 were obtained and analyzed HLGR2 is a typical GPCR and shows high structural and sequence similarity with other insect LGR2 proteins
- Pepducin-mediated G Protein-Coupled Receptor Signaling in the Cardiovascular System
agonist outcomes in various primary and clonal cell systems, with even small changes in amino acid sequence
- Accelerating GPCR Drug Discovery With Conformation-Stabilizing VHHs
GPCRs are divided into six classes based on amino acid sequence similarities, but only four of the classes
- Identification and functional characterization of the sulfakinin and sulfakinin receptor in the...
in the D. armandi and carried out bioinformatics predictions on the basis of the deduced amino acid sequences
- Comparative studies of AlphaFold, RoseTTAFold and Modeller: a case study involving the use of...
RoseTTAFold web service were used with default settings to predict five structures of each protein sequence
- Actions of Parathyroid Hormone Ligand Analogues in Humanized PTH1R Knockin Mice
Divergence, however, in the amino acid sequences of rodent and human PTH receptors (rat and mouse PTH1Rs
- Induced Human Regulatory T Cells Express the Glucagon-like Peptide-1 Receptor
Through multimodal single-cell CITE- and TCR-sequencing, we detected GLP-1R expression in 29–34% of the
- Unveiling GPCR Priming: The Hidden Synergy in Cellular Signalling
protein interactions could modulate GPCR signalling pathways without initiating traditional activation sequences
- Structural dynamics of Smoothened (SMO) in ciliary membrane and its interaction with membrane lipids
cholesterols with definite sites and domains within SMO and relate them with known cholesterol-binding sequence
- 📰 GPCR Weekly News, February 26 to March 3, 2024
repertoire and structure of adhesion GPCR transcript variants assembled from publicly available deep-sequenced
- 📰 Breaking Down the Latest GPCR Discoveries: a Weekly Update (Nov 27-Dec 3, 2023)
expression GPCR molecular dynamics forecasting using recurrent neural networks A method for multiple-sequence-alignment-free
- TM5-TM6: structural switches that modulate the coupling of serotonin receptors to Gs or Gi
Prior to this report we did not know how different serotonin receptor subtypes which share high sequence
- VAMP2: a crucial player in the delivery of MOR to the synapse
variants, its traffic to the membrane can be modified depending on the integrity of its bi-leucine sequence
- Targeting Intracellular Allosteric Sites in GPCRs
Moreover, they have the potential to enhance target selectivity, which can arise from greater sequence
- Unlocking Cell's Secrets: Spontaneous β-Arrestin-Membrane Preassociation Drives Receptor-Activation
multicolor single-molecule microscopy approach with molecular dynamics simulations, they dissected the sequence
- 📰 GPCR Weekly News
Cardiology, Endocrinology, and Taste Pathogenic variants of the GNAS gene introduce an abnormal amino acid sequence
- Glyco-sulfo hotspots in the chemokine receptor system
tyrosine sulfation in their N-terminal region which seem to be widely conserved between human and murine sequences
- Overview of adhesion GPCRs self-activation
other GPCRs in an active state, in aGPCRs the rearrangements induced by the interaction of the Stalk sequence
- Structural landscape of the Chemokine Receptor system
between inactive and active states are facilitated by a "microswitch network" composed of conserved sequence