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105 items found for "double mutant cycle analysis"
- GPR37 expression as a prognostic marker in gliomas: a bioinformatics-based analysis
Oncology and Immunology GPR37 expression as a prognostic marker in gliomas: a bioinformatics-based analysis Immunohistochemical staining of clinical samples were used to verify the speculations of bioinformatics analysis
- Ep 126 with Dr. Françoise Bachelerie
WHIM syndrome) and in the innate control of the life cycle of papillomavirus, which are commensal inhabiting
- Transcriptomic analysis of human cytomegalovirus to survey the indirect effects on renal transplant recipients
< GPCR News < GPCRs in Oncology and Immunology Transcriptomic analysis of human cytomegalovirus to survey The resulted raw data were analyzed by conventional RNA-Seq software to determine the Differentially Afterward, Gene Ontology (GO) and pathway enrichment analyses were conducted to determine the enriched Result: The analysis of RNA-Seq data related to RT patients with HCMV active viremia led to the identification KEGG pathway analysis revealed the enrichment of DEGs in IL18 signaling, AGE-RAGE signaling pathway in
- Exploration of prognostic and treatment markers in hepatocellular carcinoma via GPCR-related genes analysis
Exploration of prognostic and treatment markers in hepatocellular carcinoma via GPCR-related genes analysis Univariant and multivariant Cox regression analyses, as well as least absolute shrinkage and selection Differential expression and functional enrichment analyses were performed; protein-protein interaction
- Comparative Analysis of the GNAI Family Genes in Glioblastoma through Transcriptomics and Single-Cell Technologies
< GPCR News < GPCRs in Oncology and Immunology Comparative Analysis of the GNAI Family Genes in Glioblastoma MetaCore and gene ontology (GO) analyses were conducted to explore the role of GNAI3 in co-expressed genes and associated signaling pathways using a transcript analysis. A single-cell analysis was used to assess GNAI3 expression in GBM.
- Comparative analysis of the occupancy of Histone H3 Lysine 4 methylation in the cells treated with TGFβ and Interferonγ
< GPCR News < GPCRs in Oncology and Immunology Comparative analysis of the occupancy of Histone H3 Lysine DAVID Functional enrichment analysis in the TGFβ and IFNγ dataset revealed association of genes with Further analysis of these genes can reveal fascinating insights into epigenetic regulation by growth
- Colorectal cancer incidence trends in Golestan, Iran: An age-period-cohort analysis 2004-2018
Oncology and Immunology Colorectal cancer incidence trends in Golestan, Iran: An age-period-cohort analysis
- The EBI2 receptor is coexpressed with CCR5 in CD4+ T cells and boosts HIV-1 R5 replication
Design: We analyzed the effects of one GPCR coexpressed with CCR5, EBI2, on HIV-1 replicative cycle.
- Agonists of galanin subtype 2 receptor may prevent pancreatic cancer and agonists of angiotensin II type 2 receptor may prevent colorectal cancer
Stimulation of GAL2 receptor may modulate immune surveillance and inhibits PDAC via cell cycle inhibition
- Esophageal and gastric cancer incidence trends in Golestan, Iran: An age-period-cohort analysis 2004 to 2018
and Immunology Esophageal and gastric cancer incidence trends in Golestan, Iran: An age-period-cohort analysis
- GPCR Courses
Samuel Hoare Advanced data analysis for GPCR pharmacology Watch Premium Membership Sign up to watch If you are a premium member, your access will remain active until the end of the current billing cycle
- Ep 37 with Dr. Samuel Hoare
Today, Sam is a pharmacology data analyst and the founder of Pharmechanics LLC , a consultancy and data analysis company supporting pharmaceutical, life science, and academic scientists in the development He specializes in kinetic analysis of drug action and is known for applying binding kinetics to the development
- Deciphering the genetic landscape of lumpy skin disease: Unraveling variable virulence through comprehensive genome sequence analysis in India
landscape of lumpy skin disease: Unraveling variable virulence through comprehensive genome sequence analysis A comprehensive genetic study conducted, analyzing samples from 2019 to 2022 revealed circulation of Notably, the Ankyrin repeats gene-based analysis could differentiate animals with varying clinical scores
- Unbiased multitissue transcriptomic analysis reveals complex neuroendocrine regulatory networks mediated by spinal cord injury-induced immunodeficiency
< GPCR News < GPCRs in Oncology and Immunology Unbiased multitissue transcriptomic analysis reveals complex The transcriptome analysis results showed that the downregulated differentially expressed genes (DEGs
- Characterization, expressional and evolutionary analysis of five fish-specific CCRs (CCR4La, CCR4Lc, CCR12a1, CCR12a2, and CCR12b) in largemouth bass (Micropterus salmoides)
< GPCR News < GPCRs in Oncology and Immunology Characterization, expressional and evolutionary analysis The correction of nomenclatures of these CCRs were confirmed by phylogenetic analysis, structural analysis and genomic synteny analysis. The accuracy of the pressure selected sites were also validated by molecular docking analysis. The potential ligands for these five CCRs were identified by molecular docking analysis, with finding
- Dr. GPCR Community Presentation | Adhesion GPCR Workshop 2024 | Dr. GPCR Ecosystem
Zozaya "My doctoral research was focused on investigating the cellular effects of missense lung cancer-mutations
- Ep 86 with Nicole (Nicki) Perry-Hauser
Mutations in aGPCRs have been linked to various neuropsychiatric phenotypes, and my work will provide
- Unveiling G-protein coupled receptors as potential targets for ovarian cancer nanomedicines: from RNA sequencing data analysis to in vitro validation
G-protein coupled receptors as potential targets for ovarian cancer nanomedicines: from RNA sequencing data analysis Here we report on the systematic analysis of public ribonucleic acid-sequencing (RNA-seq) gene expression
- Identification of a G-protein coupled receptor-related gene signature through bioinformatics analysis to construct a risk model for ovarian cancer prognosis
Immunology Identification of a G-protein coupled receptor-related gene signature through bioinformatics analysis GPCRRGs were screened using least absolute shrinkage and selection operator (LASSO) Cox regression analysis The predictive ability of the model was evaluated by Kaplan-Meier (K-M) survival analysis. gene set enrichment analysis (ssGSEA) and CIBERSORT. K-M analysis of the prognostic model showed that it could differentiate high- and low-risk patients,
- Full Agenda for Adhesion GPCR Workshop 2024 | Dr. GPCR Ecosystem
scaffolding and G protein signaling roles of GPR56/ADGRG1 via the characterization of a non-cleavable point mutant
- Ep 150 with Dr GPCR Team
During that time, I investigated the effect of lung cancer-related mutations in the GAIN domain of the studies, she has used computational methods like molecular dynamics simulations and free energy landscape analysis
- Lactate receptor GPR81 drives breast cancer growth and invasiveness through regulation of ECM properties and Notch ligand DLL4
GPR81 was stably knocked down (KD) in MCF-7 human breast cancer cells which were subjected to RNA-seq analysis , 3D growth, in situ- and immunofluorescence analyses, and cell viability- and motility assays, combined Single cell in situ analysis of MCF-7 cells revealed that several GPR81-regulated genes were upregulated
- Posters | Adhesion GPCR Workshop 2024 | Dr. GPCR Ecosystem
Through study of known protein isoforms of CELSR1, which would be missed in gene expression microarray analyses For baseline phenotypic characterization, blood gas analysis showed no differences in blood pH, blood cancers, BAI1-3 expression can be lost through epigenetic silencing, copy number loss or truncating mutations WNT pathway activation in WNT-MB is driven by mutations of the CTNNB1 gene, activating ß-catenin-dependent GAIN-targeted antibodies, and cancer-associated mutations at the GAIN-7TM interface, alter holoreceptor
- Ep 146 with Dr Michael Feigin
He also continued his interest in computational analysis of cancer drivers by co-developing GECCO, an algorithm for the identification of noncoding mutations driving gene expression in pancreatic cancer He highlighted their interest in non-coding mutations in promoters and the 3'UTR region important for
- Session VII | Adhesion GPCR Workshop 2024 | Dr. GPCR Ecosystem
Phylogenetic analysis revealed that the remoulade (remo) gene is a homologue of the vertebrate aGPCR Furthermore, with the aim to analyse the biochemical properties of Remo, we performed immunoprecipitation analysis. Remo may serve a role in this peculiar signaling pathway and require further analysis."
- A disturbed metabolite-GPCR axis is associated with microbial dysbiosis in IBD patients: Potential role of GPR109A in macrophages
Furthermore, metabolomic analysis revealed alterations in carboxylic acids, fatty acids, and amino acids These patients also exhibited upregulated expression of most metabolite-sensing GPCRs analysed, which
- Inhibition of Relaxin Autocrine Signaling Confers Therapeutic Vulnerability in Ovarian Cancer
The adapter protein 3BP2 is mutated in Cherubism.
- Atypical Structure and Function of Typical Chemokine Receptors
This is a rare neurodevelopmental disorder caused by de novo mutations in the GRIN genes that encode