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397 items found for "proteomics"

  • 📰 GPCR Weekly News

    Dynamic spatiotemporal determinants modulate GPCR:G protein coupling selectivity and promiscuity. Quantification of changes in human islet G protein-coupled receptor mRNA expression in obesity. Cryo-EM structure of G-protein-coupled receptor GPR17 in complex with inhibitory G protein. Current Technologies To Understand G-Protein-Coupled Receptor Molecular Pharmacology. The Illuminating the Understudied Druggable Proteome Conference.

  • 📰 GPCR Weekly News, February 20 to 26, 2023

    Small-molecule targeting of GPCR-independent non-canonical G protein signaling inhibits cancer progression A robust approach for MicroED sample preparation of lipidic cubic phase embedded membrane protein crystals The Illuminating the Understudied Druggable Proteome Conference. (Research Software Engineer) Senior Scientist – Native Mass Spectrometry Speculative Applications (Protein

  • 📰 GPCR Weekly News

    Increased protease-activated receptor 1 autoantibodies are associated with severe COVID-19. A robust antibody discovery platform for difficult-to-express G protein-coupled receptors. Non-ionic cholesterol-based additives for the stabilization of membrane proteins. "Structural Clarity is Brought to Adhesion G protein Coupled Receptor Tethered Agonism". The Illuminating the Understudied Druggable Proteome Conference.

  • 📰 GPCR Weekly News, March 13 to 19, 2023

    G protein-coupled receptor pharmacology - insights from mass spectrometry. The Illuminating the Understudied Druggable Proteome Conference. Associate Scientist, Protein Science. Explore Dr. GPCR Ecosystem

  • 📰 GPCR Weekly News, November 20 to 26, 2023

    is a potent neutrophil chemoattractant Methods & Updates in GPCR Research GproteinDb in 2024: new G protein-GPCR into GPCR Function Structural and signaling mechanisms of TAAR1 enabled preferential agonist design Proteome-wide

  • Fusion protein strategies for cryo-EM study of G protein-coupled receptors

    cryogenic-electron microscopy (cryo-EM) is used extensively to determine structures of activated G protein-coupled receptors (GPCRs) in complex with G proteins or arrestins. However, applying it to GPCRs without signaling proteins remains challenging because most receptors lack In GPCR crystallography, inserting a fusion protein between transmembrane helices 5 and 6 is a highly Here, we address this shortcoming by exploring different fusion protein designs, which lead to structures

  • Advancements in G protein-coupled receptor biosensors to study GPCR-G protein coupling

    Biosensors for monitoring G protein-coupled receptors (GPCRs), the most drugged class of proteins in Their applications have continually expanded our understanding of this important protein class.

  • 📰 GPCR Weekly News, March 27 to April 4, 2023

    The adhesion G-protein-coupled receptor VLGR1/ADGRV1 controls autophagy. Itch receptor MRGPRX4 interacts with the receptor activity-modifying proteins (RAMPs). Regulator of G-Protein Signalling 4 (RGS4) negatively modulates nociceptin/orphanin FQ opioid receptor Developmental and homeostatic signaling transmitted by the G-protein coupled receptor FPR2. The Illuminating the Understudied Druggable Proteome Conference.

  • GPCR Updates: Celebrating Breakthroughs, New Course Launches Soon, and Exclusive Discounts! | Aug 26 - Sep 1, 2024

    Małgorzata Kogut-Günthel , Antonella Di Pizio , et al. for their research on The path to the G protein-coupled GPCR Event Spotlight Discovery on Target’s 19th Annual GPCR-Based Drug Discovery Targeting G Protein-Coupled Developers Find Buried Treasures Edelris Announces Research Services Agreement with Pfizer on Targeted Protein research position Senior or Lead Researcher   GPCR Activation and Signaling Profiling the proximal proteome Receptors in Skin Aging The path to the G protein-coupled receptor structural landscape: Major milestones

  • 📰 GPCR Weekly News, March 25 to March 31, 2024

    dynamics simulations Preassembly of specific Gβγ subunits at GABAB receptors through auxiliary KCTD proteins TRPM5 activation depends on a synergistic effect of calcium and PKC phosphorylation After wounding, a G-protein coupled receptor promotes the restoration of tension in epithelial cells Profiling the proximal proteome tolerance, and chromatographic performance Fluorine-19 labeling of the tryptophan residues in the G protein-coupled Exhibition June 2 - 7, 2024 | Chemotactic Cytokines June 9 - 14, 2024 | 2024 Phosphorylation and G-Protein

  • 📰 GPCR Weekly News, January 30 to February 5, 2023

    Genetic code expansion to enable site-specific bioorthogonal labeling of functional G protein-coupled Platelet P2Y1 receptor exhibits constitutive G protein signaling and β-arrestin 2 recruitment. Computational investigation of functional water molecules in GPCRs bound to G protein or arrestin. Cryo-EM structure of orphan G protein-coupled receptor GPR21. The Illuminating the Understudied Druggable Proteome Conference.

  • Therapeutic validation of an orphan G protein‐coupled receptor

    Historically, ligands for GPCRs have been identified before their receptor counterparts. With the cloning revolution, several unidentified receptors have been found and were labelled as “orphan” for their endogenous ligands. Orphan GPCRs have been shown to play key roles in various physiological functions, such as sensory perception, reproduction, development, growth, metabolism, and are also linked to major diseases, such as neuroinflammatory, metabolic and autoimmune diseases. Therefore, matching a ligand to an orphan GPCRs, the process of de-orphanizing, is of great importance in order to better understanding human physiology as well as to dissect the molecular mechanism governing the involvement of these receptors in human pathology. GPR84 is an example of an orphan GPCR (Sharman et al., 2011), although it is widely accepted that medium‐chain fatty acids (MCFAs) can bind to and activate this receptor with modest potency. GPR84 is a Gi‐coupled class A GPCR mainly expressed in immune cells and microglia in the brain (Wojciechowicz & Ma'ayan, 2020). GPR84 has been shown to be an attractive target in pro‐inflammatory conditions (Gagnon et al., 2018; Suzuki et al., 2013; Vermeire et al., 2017; Wojciechowicz & Ma'ayan, 2020) and efforts have been made to discover GPR84 antagonists. In this study Marsango et al. address two key questions in GPR84 biology and pharmacology: 1. how GPR84 expression profile correlates with physiological and pathological conditions? and 2. which ligands can be used as tool compounds to study the function and biology of this receptor? Regarding the first question, GPR84 overexpression in immune cells in a range of pro‐inflammatory disorders renders it a promising target in inflammatory and fibrotic conditions, including neuroinflammation (Audoy‐Remus et al., 2015), with ongoing clinical trials in idiopathic pulmonary fibrosis (Labéguère et al., 2014). GPR84 has been additionally proposed to be a potential biomarker in different inflammatory diseases (Arijs et al., 2011; Planell et al., 2017). Some studies have also reported GPR84 involvement in pain, atherosclerosis, and even metabolic disorders (Nicol et al., 2015, Audoy‐Remus et al., 2015, Du Toit et al., 2018). Regarding the second question, there is still a lot to be done in respect to tool compounds to study the function of this receptor towards clinical validation, as well as radiopharmaceuticals, including potential PET ligands, and suitable antibodies. Recent work has shown distinct functional outcomes of agonist ligands (Pillaiyar et al., 2018) with biased properties which can help to better elucidate the molecular pharmacology of this receptor. In addition, several GPR84 ligands have been described as well as GPR84 knockout mice. Among these ligands are orthosteric agonists such as alkylpyrimidine‐4,6‐diol derivatives (Liu et al., 2016; Zhang et al., 2016) and embelin (2,5‐dihydroxy‐3‐undecyl‐1,4‐benzoquinone) which is a natural product derived from the plant Embelia ribes (Gaidarov et al., 2018) which agonizes GPR84 but, interestingly, blocks the chemokine receptor CXCR2 and the adenosine A3 receptor (Gaidarov et al., 2018). IM (3,3′‐methylenebis‐1H‐indole) has been identified as a positive allosteric modulator of GPR84, a metabolite produced in vivo from indole‐3‐carbinol, which is present at high levels in some vegetables including broccoli and kale (Wang, Schoene, Milner, & Kim, 2012, Köse et al., 2020). GPR84 antagonists include a series of dihydropyrimidinoisoquinolinones (Labéguère et al., 2014), which behave as non‐competitive antagonists of GPR84 (Labéguère et al., 2020). From these series of compounds, GLPG1205 progressed into clinical development for the potential treatment of ulcerative colitis although it did not demonstrate sufficient efficacy (Labéguère et al., 2020). Overall, GPR84 is a promising target to exploit and the investment in better tools to study its function in both disease and physiological settings will likely potentiate drug discovery campaigns against this orphan GPCR. Check the original article at here! #GPCR #DrGPCR#Ecosystem

  • Mechanistic Understanding of the Palmitoylation of Go Protein in the Allosteric Regulation of...

    October 2022 Mechanistic Understanding of the Palmitoylation of Go Protein in the Allosteric Regulation of Adhesion Receptor GPR97 "Adhesion G-protein-coupled receptors (aGPCRs)-a major family of GPCRs-play Although it has been established that the palmitoylation of the C-terminal Go protein is essential for overall conformation of GPR97 is preferred to be fully active when interacting with palmitoylated Go protein provides mechanistic insights into the regulation of aGPCRs via post-translational modifications of the Go protein

  • G protein-coupled receptor signaling: transducers and effectors

    October 2022 "G protein-coupled receptors (GPCRs) are of considerable interest due to their importance in the cardiovascular system of the three most important GPCR signaling effectors: heterotrimeric G proteins

  • G protein coupling and activation of the metabotropic GABAB heterodimer

    September 2022 "Metabotropic γ-aminobutyric acid receptor (GABABR), a class C G protein-coupled receptor Cryo-electron microscopy studies revealed a drastic conformational change upon activation and a unique G protein

  • Regulators of G-protein signaling: essential players in GPCR signaling

    Regulator G protein Signaling (RGS) proteins are critical components of the intracellular signaling pathways between RGS proteins and GPCRs is mediated by a range of structural motifs, including the G protein-binding Implications of RGS protein dysregulation in disease: The Dysregulation of RGS proteins has been implicated In conclusion, RGS proteins are essential modulators for the GPCR signaling mediated by G proteins, which Hepler, Cellular regulation of RGS proteins: modulators and integrators of G protein signaling.

  • Phospholipid Scrambling by G Protein-Coupled Receptors

    The transport proteins that facilitate this process are classified as pump-like flippases and floppases Unexpectedly, Class A G protein-coupled receptors (GPCRs), a large class of signaling proteins exemplified

  • Decoding β-Arrestins: from Structure to function

    diverse responses based on cell-specific G protein expression. X-ray protein crystallography yields high-resolution protein structures, illuminating side chain orientations Uncovering these interacting effector proteins requires comprehensive and unbiased proteomic datasets β-arrestin1 and 2 serve overlapping or distinct functions remains, raising the need for more comprehensive protein-protein Thus, exploring large-scale protein-protein interaction datasets could shed light on connections between

  • Hear the sounds: the role of G protein-coupled receptors in the cochlea

    G protein-coupled receptors (GPCRs) are crucial receptors that regulate a wide range of physiological And A1, A2A, and CB2 activation by agonists has protective functions on noise- or drug-induced hearing and discuss the role of GPCR in the cochlea, such as stem cell fate, PCP, hearing loss, and hearing protection

  • Nanobodies as Probes and Modulators of Cardiovascular G Protein-Coupled Receptors

    October 2022 "Understanding the activation of G protein-coupled receptors (GPCRs) is of paramount importance rapidly due to their biochemical tractability and their ability to recognize defined states of native proteins

  • G protein-coupled receptor 21 in macrophages: An in vitro study

    August 2022 "GPR21 is an orphan and constitutively active receptor belonging to the superfamily of G-Protein GPR21 couples to the Gq family of G proteins and is expressed in macrophages. GPR21 expression was evaluated at gene and protein level, the signalling pathway was investigated by

  • Artificial intelligence – faster, smarter, cheaper GPCR drug discovery

    datasets regarding ligand synthesis and screening, ligand binding assays, signaling assays, cell imaging, protein data is classified and compared; and 3) detection, prediction, or generation (e.g. prediction of a protein GPCR-ligand interactions: ML can predict GPCR-ligand interactions based on input data of protein sequences AI algorithms can integrate data from multiple sources, including genomics, proteomics, and pharmacological limitations (e.g. using sequence information alone to determine similarity cannot adequately predict protein

  • G-protein-coupled receptors as therapeutic targets for glioblastoma

    In this review, we focus on recent advances in G-protein-coupled receptor (GPCR) targets.

  • Ligands can differentially and temporally modulate GPCR interaction with 14-3-3 isoforms

    September 2022 "GPCR signaling and function depend on their associated proteins and subcellular locations Besides G-proteins and β-arrestins, 14-3-3 proteins participate in GPCR trafficking and signaling, and they connect a large number of diverse proteins to form signaling networks.

  • Conservation of Allosteric Ligand Binding Sites in G-Protein Coupled Receptors

    November 2022 "Despite the growing number of G protein-coupled receptor (GPCR) structures, only 39 structures These structures have been studied by protein mapping using the FTMap server, which determines the clustering of small organic probe molecules distributed on the protein surface. Mapping of Alphafold2 generated models of these proteins confirms that the same sites can be identified These sites cluster at nine distinct locations, and each can be found in many different proteins.

  • Design and validation of recombinant protein standards for quantitative Western blot analysis of...

    October 2022 Design and validation of recombinant protein standards for quantitative Western blot analysis radioligand binding assays with antibody-antigen interaction-based approaches for quantitative analysis of G protein-coupled receptor (GPCR) levels requires the use of purified protein standards containing the antigen. Results: Here we generated highly soluble and stable recombinant protein constructs GST-CB1414-472 and

  • Viral G Protein-Coupled Receptors Encoded by β- and γ-Herpesviruses

    Most acquired genes are transmembrane proteins and cytokines, such as viral G protein-coupled receptors (vGPCRs), chemokines, and chemokine-binding proteins.

  • Protein Uncoupling as an Innovative Practice in Diabetes Mellitus Treatment: A Metabolic Disorder

    October 2022 "Background: Uncoupling proteins (UCPs) are unpaired electron carriers that uncouple oxygen hypothesised to be triggered by superoxide and then reduce mitochondrial free radical production, potentially protecting Objectives: The objectives of the study are to find out the newest ways to treat diabetes mellitus through protein

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