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52 items found for "Genome sequence"
- Deciphering the genetic landscape of lumpy skin disease: Unraveling variable virulence through comprehensive genome sequence analysis in India
Deciphering the genetic landscape of lumpy skin disease: Unraveling variable virulence through comprehensive genome sequence analysis in India Published date May 23, 2024 Abstract "Lumpy Skin Disease (LSD), a poxvirus A crucial finding was a significant 95-nucleotide deletion in the Functional Resolution Sequence (FRS ) repeats of LSDV genomes from 2022 outbreaks, absent in 2019 samples. sequence , Lumpy skin disease , Molecular diversity , Virulence Source Contribute to the GPCR News Coming
- Mutation Patterns Predict Drug Sensitivity in Acute Myeloid Leukemia
The objective of this study was to elucidate the genomic basis of drug resistance or sensitivity, identify Experimental design: We performed targeted sequencing, high-throughput drug screening, and single-cell genomic profiling on leukemia cell samples derived from patients with AML. The application of single-cell genomic sequencing unveiled the co-occurrence of variants at the individual
- C5aR2 receptor: The genomic twin of the flamboyant C5aR1
< GPCR News < GPCRs in Oncology and Immunology C5aR2 receptor: The genomic twin of the flamboyant C5aR1 C5a is established to interact with a set of genomically related transmembrane receptors, like C5aR1
- Comparative Analysis of the GNAI Family Genes in Glioblastoma through Transcriptomics and Single-Cell Technologies
We used The Cancer Genome Atlas (TCGA) GBM genomic dataset to identify differentially expressed genes nucleotide-binding protein G(i) alpha subunit (GNAI) family of genes in GBM using a Chinese Glioma Genome Wangsawijaya Santoso , Bianca Tobias William , Chih-Yang Wang Tags G-protein-coupled receptor (GPCR) , genome
- Pan-cancer functional analysis of somatic mutations in G protein-coupled receptors
Here we used a dataset of mutations found in patient samples derived from the Genomic Data Commons and compared it to the natural human variance as exemplified by data from the 1000 genomes project. Two-Entropy Analysis confirmed the correlation between residue conservation and cancer-related mutation frequency
- Ep 93 with Dr. Sri Kosuri
biologist that has helped build technologies, labs, and companies in synthetic biology, functional genomics biochemistry, human genetic variation, gene regulation, chemical biology, synthetic biology, and functional genomics
- The Effect of Cancer-Associated Mutations on Ligand Binding and Receptor Function - A Case for the 5-HT2C Receptor
By filtering the sequencing data from the Genomic Data Commons data portal (GDC), we selected 12 mutations
- Exploration of prognostic and treatment markers in hepatocellular carcinoma via GPCR-related genes analysis
Patients' data on HCC were sourced from the Liver Hepatocellular Carcinoma-Japan (LIRI-JP) and The Cancer Genome Sensitivity to immunotherapy and common antitumor drugs was predicted via the database Genomics of Drug
- PAXIP1-AS1 is associated with immune infiltration and predicts poor prognosis in ovarian cancer
of OC patients and its regulatory network are unclear. 379 OC tissues were collected from The Cancer Genome There were some genomic variations between the PAXIP1-AS1 high and low expression groups.
- G Proteins and GPCRs in Cancer: Novel Precision Targeted and Immunotherapies
He is exploiting the emerging information on dysregulated signaling circuitries and individual genomic
- Ep 115 with Dr. Paul J. Gasser
University, where I worked in the lab of Miles Orchinik, studying cellular mechanisms underlying non-genomic
- Ep 38 with Dr. Alexander S. Hauser
Alexander has a big interest in the integration of large biomedical data in genomics, structural biology
- Ep 18 with Dr. Yamina Berchiche
The explosion of biomedical data such as in genomics, structural biology, and pharmacology can provide
- Session VII | Adhesion GPCR Workshop 2024 | Dr. GPCR Ecosystem
pathway of the ADGRA homolog Remoulade in Drosophila Beatriz Blanco Redondo Abstract "The Drosophila genome We found that the receptor is cleaved despite the lack of a consensus GPS sequence.
- Inhibition of Relaxin Autocrine Signaling Confers Therapeutic Vulnerability in Ovarian Cancer
He has focussed on developing a comprehensive map of ovarian cancer essential genes using whole genome
- GPCR signaling contributes to immune characteristics of microenvironment and process of EBV-induced lymphomagenesis
lymphoma (NKTCL), a representative disease model to study EBV-induced lymphomagenesis, incorporating genomic
- Ep 71 with Dr. Jean Martin Beaulieu
engaged by D2R and psychiatric drugs with genetic risk factors implicated in schizophrenia by large whole-genome
- The EBI2 receptor is coexpressed with CCR5 in CD4+ T cells and boosts HIV-1 R5 replication
Finally, the presence of EBI2 induced the translocation of NFkB and activated HIV-1 genome expression
- Characterization, expressional and evolutionary analysis of five fish-specific CCRs (CCR4La, CCR4Lc, CCR12a1, CCR12a2, and CCR12b) in largemouth bass (Micropterus salmoides)
correction of nomenclatures of these CCRs were confirmed by phylogenetic analysis, structural analysis and genomic
- Mechanistic exploration of bioactive constituents in Gnetum gnemon for GPCR-related cancer treatment through network pharmacology and molecular docking
Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were
- Spliceosome mutations are associated with clinical response in a phase 1b/2 study of the PLK1 inhibitor onvansertib in combination with decitabine in relapsed or refractory acute myeloid leukemia
Bone marrow (BM) samples were collected at baseline for genomic and transcriptomic analysis (n = 32).
- Interrogating Multiscale Receptors Functions in Space
engaged by D2R and psychiatric drugs with genetic risk factors implicated in schizophrenia by large whole-genome
- Identification of a G-protein coupled receptor-related gene signature through bioinformatics analysis to construct a risk model for ovarian cancer prognosis
Method: We downloaded data from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) databases
- Classified News | Dr. GPCR Ecosystem
on-off switches: deep dive into GPCR-ligand interactions Read More April 16, 2024 From DNA day to GPCR genomics
- Ep 151 with Dr GPCR Board
the Steering Committee of the San Diego Supercomputer Center, and provided consultation for genetic sequence technical point of contact for customers assessing features of software products for drug discovery and genomic
- GPR15 expressed in T lymphocytes from RA patients is involved in leukocyte chemotaxis to the synovium
GPR15 is a G protein-coupled receptor (GPCR) located on chromosome 3 and has similarity in its sequence synovial fluid and peripheral blood were analyzed for CD45+CD3+CD4+GPR15+ and CD45+CD3+CD8+GPR15+ T cell frequency The frequencies of CD4+/CD8+ GPR15+ T lymphocytes are higher in RA patients comparing with healthy subjects Also, the frequency CD4+/CD8+ GPR15+ T lymphocytes are higher in synovial fluid of established RA patients
- Student Flash Presentations | Adhesion GPCR Workshop 2024 | Dr. GPCR Ecosystem
Isolated GBM stem cells were collected for further genomic analyses and to test whether overexpression To explore the existence of BAI1 isoforms, we queried genomic datasets for markers of active chromatin We performed single-nucleus RNA sequencing on male and female kidneys. snRNAseq revealed abundant, cell-specific
- Unveiling G-protein coupled receptors as potential targets for ovarian cancer nanomedicines: from RNA sequencing data analysis to in vitro validation
Unveiling G-protein coupled receptors as potential targets for ovarian cancer nanomedicines: from RNA sequencing Here we report on the systematic analysis of public ribonucleic acid-sequencing (RNA-seq) gene expression