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258 items found for "Prognostic model"

  • GRK3 is a poor prognosticator and serves as a therapeutic target in advanced gastric adenocarcinoma

    Our genomic analysis showed that GRK3 expression correlated with poor prognosis of gastric adenocarcinoma Through genetic and pharmacologic modulations of GRK3, a series of functional and molecular studies were

  • Expression pattern and clinical significance of beta 2-adrenergic receptor in oral squamous cell...

    and clinical significance of beta 2-adrenergic receptor in oral squamous cell carcinoma: an emerging prognostic is significantly overexpressed in various types of malignancies, which is associated with the worst prognosis

  • A correlation study of adhesion G protein-coupled receptors as potential therapeutic targets in...

    August 2022 A correlation study of adhesion G protein-coupled receptors as potential therapeutic targets in Uterine Corpus Endometrial cancer "Adhesion G protein-coupled receptors (adhesion GPCRs), as a member of the G protein-coupled receptors (GPCRs) superfamily, have gradually entered the field of vision of researchers. The structure, function, and involvement of adhesion GPCRs in cancer development have been discussed in a series of papers. Uterine Corpus Endometrial Carcinoma (UCEC) isa malignanttumorofendometrium epithelial, whichis alsooneofthemostcommonfemalereproductivesystemtumors, but there are few pieces of research related to adhesion GPCRs in UCEC." Read more at the source #DrGPCR #GPCR #IndustryNews

  • The expression and clinical significance of GPR39 in colon cancer

    September 2022 " Background: Colorectal cancer is the third most common cancer and requires more prognostic GPR39 is a GPCR which can interact with Zn and modulate the colonocytes' survival. The prognostic significance of GPR39 was estimated with univariate and multivariate analyses. The prognostic value of PPARG, EPCAM, and PD-L1 was also estimated with univariate analysis."

  • Comparative studies of AlphaFold, RoseTTAFold and Modeller: a case study involving the use of...

    October 2022 Comparative studies of AlphaFold, RoseTTAFold and Modeller: a case study involving the use Although the overall accuracy of the two non-homology-based modeling methods, AlphaFold and RoseTTAFold for GPCRs with the most widely used template-based software-Modeller. If only looking at each program's top-scored structure, Modeller had the smallest average modeling RMSD 73 cases with the top-scored model, respectively, where no good templates were available for Modeller

  • Integrative model of the FSH receptor reveals the structural role of the flexible hinge region

    vitro and in situ chemical crosslinking, disulfide pattern analysis, and mutation data with molecular modeling to generate experimentally driven full-length models. These models provide insights into the interface, important side-chain interactions, and activation mechanism The models are expected to allow for testable hypotheses about signal transduction and drug development

  • Dynamics of tumor-associated macrophages in a quantitative systems pharmacology model of...

    September 2022 Dynamics of tumor-associated macrophages in a quantitative systems pharmacology model of immunotherapy in triple-negative breast cancer "Quantitative systems pharmacology (QSP) modeling is immuno-suppressive tumor microenvironment, we incorporated the dynamics of TAMs into our previously published QSP model We show that through proper calibration, the model captures the macrophage heterogeneity in the tumor

  • Bell-Evans model and steered molecular dynamics in uncovering the dissociation kinetics of ligands..

    October 2022 Bell-Evans model and steered molecular dynamics in uncovering the dissociation kinetics approach of combining the data derived from steered molecular dynamics simulations and the Bell-Evans model

  • Primary cilia and SHH signaling impairments in human and mouse models of Parkinson’s disease

    Additionally, we detect a shortening of PC in PINK1 -deficient human cellular and mouse models of familial Furthermore, in sPD models, the shortening of PC is accompanied by increased Sonic Hedgehog (SHH) signal

  • G protein-coupled receptors that influence lifespan of human and animal models

    analysis of a series of GPCRs whose activity has been shown to affect the lifespan of animal and human models

  • Regulator of G Protein Signaling 20 Correlates with Long Intergenic Non-Coding RNA (lincRNAs)...

    Considering this, we investigated the role of RGS20 as a potential prognostic marker in 28 different

  • A Model for the Signal Initiation Complex Between Arrestin-3 and the Src Family Kinase Fgr

    We report that arrestin-3 modulates Fgr activity with a hallmark bell-shaped concentration-dependence interaction, we determined the crystal structure of the Fgr SH3 domain at 1.9 Å resolution and developed a model This model suggests that Fgr interacts with arrestin-3 at multiple sites and is consistent with the locations

  • Functional modulation of PTH1R activation and signaling by RAMP2

    receptors (GPCRs), including the parathyroid hormone 1 receptor (PTH1R), a class B GPCR and an important modulator activation of PTH1R and its downstream signaling, we describe here that RAMP2 acts as a specific allosteric modulator Moreover, RAMP2 modulates PTH1R downstream signaling in an agonist-dependent manner, most notably increasing Employing homology modeling, we describe the putative structural molecular basis underlying our functional of RAMPs in the activation and signaling of a GPCR that may provide a new venue for highly specific modulation

  • A cryptic mode of GPCR regulation revealed

    October 2022 "Over three decades of research have provided thorough insights into G protein-coupled receptor (GPCR) regulation. In a recent issue of Molecular Cell, Fonseca et al. identified a previously overlooked desensitization mechanism. Agonist activation of the β2-adrenoceptor (β2AR) causes its S-nitrosylation that is required for the receptor to internalize and desensitize. Eliminating β2AR S-nitrosylation by mutation of C265 augments β2AR protein kinase A signaling, enables β2AR nitric oxide (NO) signaling, renders mice resistant to bronchoconstriction, and protects mice from allergen-induced asthma." Read more at the source #DrGPCR #GPCR #IndustryNews

  • TLR4 biased small molecule modulators

    Biased pharmacological modulators provide potential therapeutic benefits, including greater pharmacodynamic Therefore, the identification of such modulators as drug candidates is highly desirable. The biased signaling modulation of non-GPCR receptors has yet to be exploited. The challenges and methods for the discovery of TLR4 biased modulators are also outlined. modulators for other non-GPCR receptors.

  • G protein coupling and activation of the metabotropic GABAB heterodimer

    studies revealed a drastic conformational change upon activation and a unique G protein (GP) binding mode

  • Molecular mechanism of allosteric modulation for the cannabinoid receptor CB1

    September 2022 "Given the promising clinical value of allosteric modulators of G protein-coupled-receptors (GPCRs), mechanistic understanding of how these modulators alter GPCR function is of significance. cryo-electron microscopy structures of the cannabinoid receptor CB1 bound to the positive allosteric modulator In contrast, ORG27569, a negative allosteric modulator (NAM) of CB1, also binds to the TM2-TM3-TM4 surface the understanding of CB1 allosteric regulation and could guide the rational design of CB1 allosteric modulators

  • Nanobodies as Probes and Modulators of Cardiovascular G Protein-Coupled Receptors

    Although many cardiovascular GPCRs have been extensively studied as model receptors for decades, new As a result, there is an ongoing need to develop novel approaches to monitor and to modulate GPCR activation

  • Molecular basis for ligand modulation of the cannabinoid CB 1 receptor

    molecular understanding of CB1 ligand interactions, selectivity, receptor activation and allosteric modulation In this review, we describe the structural determinants for modulation of CB1 receptors by different

  • Statin-induced increase in actin polymerization modulates GPCR dynamics and compartmentalization

    However, reorganization of the actin cytoskeleton upon modulation of membrane cholesterol and its consequences crucial neurotransmitter G protein-coupled receptor (GPCR) that plays a major role in the generation and modulation indicate that lateral diffusion parameters of serotonin1A receptors in normal cells are consistent with models

  • The development of modulators for lysophosphatidic acid receptors: A comprehensive review

    provides an extensive review on the current status of ligand development targeting LPA receptors to modulate

  • Allosteric modulation of GPCRs: From structural insights to in silico drug discovery

    development of ligands targeting the binding site of endogenous ligands (orthosteric site), allosteric modulators Recent advances in the structure determination of GPCRs bound to different types of allosteric modulators structures available today, will facilitate structure-based discovery and development of allosteric modulators location of allosteric pockets, receptor-ligand interactions, and the chemical features of the allosteric modulators

  • Cholesterol occupies the lipid translocation pathway to block phospholipid scrambling by a GPCR

    Our previous Markov State Model (MSM) analysis of molecular dynamics simulations of membrane-embedded

  • Modulation of Striatal Adenosinergic Function by HTL0041178, a Selective GPR52 Agonist

    work at SIRS2022 confirming the ability of the highly selective novel GPR52 agonist HTL00411718 to modulate

  • Pharmacophore-guided Virtual Screening to Identify New β 3 -adrenergic Receptor Agonists

    Previous pharmacophore modeling studies of the β3 -AR did not involve experimental in vitro validation Ligand-based pharmacophore modeling was performed since no 3D structure of human β3 -AR is yet available A dataset consisting of β3 -AR agonists was prepared to build and validate the pharmacophore models. The best model was employed for prospective virtual screening, followed by physicochemical property filtering

  • Addex and Indivior Extend GABAB Positive Allosteric Modulator Research Collaboration for...

    August 2022 Addex and Indivior Extend GABAB Positive Allosteric Modulator Research Collaboration for Therapeutics (SIX and Nasdaq: ADXN), a clinical-stage pharmaceutical company pioneering allosteric modulation-based discovering and developing novel oral gamma-aminobutyric acid subtype B (GABAB) positive allosteric modulator

  • ADGRL3 genomic variation implicated in neurogenesis and ADHD links functional effects to the...

    October 2022 ADGRL3 genomic variation implicated in neurogenesis and ADHD links functional effects to the incretin polypeptide GIP "Attention deficit/hyperactivity disorder (ADHD) is the most common childhood neurodevelopmental disorder. Single nucleotide polymorphisms (SNPs) in the Adhesion G Protein-Coupled Receptor L3 (ADGRL3) gene are associated with increased susceptibility to developing ADHD worldwide. However, the effect of ADGRL3 non-synonymous SNPs (nsSNPs) on the ADGRL3 protein function is vastly unknown. Using several bioinformatics tools to evaluate the impact of mutations, we found that nsSNPs rs35106420, rs61747658, and rs734644, previously reported to be associated and in linkage with ADHD in disparate populations from the world over, are predicted as pathogenic variants. Docking analysis of rs35106420, harbored in the ADGLR3-hormone receptor domain (HRM, a common extracellular domain of the secretin-like GPCRs family), showed that HRM interacts with the Glucose-dependent insulinotropic polypeptide (GIP), part of the incretin hormones family. GIP has been linked to the pathogenesis of diabetes mellitus, and our analyses suggest a potential link to ADHD. Overall, the comprehensive application of bioinformatics tools showed that functional mutations in the ADGLR3 gene disrupt the standard and wild ADGRL3 structure, most likely affecting its metabolic regulation. Further in vitro experiments are granted to evaluate these in silico predictions of the ADGRL3-GIP interaction and dissect the complexity underlying the development of ADHD." Read more at the source #DrGPCR #GPCR #IndustryNews

  • TM5-TM6: structural switches that modulate the coupling of serotonin receptors to Gs or Gi

    Likewise, in this work the authors identify for the first time the specific amino acids that modulate

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